ms {MetabolicSurv} | R Documentation |
The ms class
Description
The ms class
Constructor for the ms class
Usage
ms(Result, HRRG, Group, Metnames)
ms(Result, HRRG, Group, Metnames)
Arguments
Result |
A list of dataframes of each output object of coxph for the metabolites. |
HRRG |
A dataframe with estimated metabolite-specific HR for low risk group and 95 percent CI. |
Group |
A matrix of the classification group a subject belongs to for each of the metabolite analysis. The metabolites are on the rows and the subjects are the columns |
Metnames |
The names of the metabolites for the analysis |
Value
object of class ms
Slots
Result
A list of dataframes of each output object of coxph for the metabolites.
HRRG
A dataframe with estimated metabolite-specific HR for low risk group and 95 percent CI.
Group
A matrix of the classification group a subject belongs to for each of the metabolite analysis. The metabolites are on the rows and the subjects are the columns
Metnames
The names of the metabolites for the analysis
Author(s)
Olajumoke Evangelina Owokotomo, olajumoke.owokotomo@uhasselt.be
Ziv Shkedy
See Also
Examples
## GENERATE SOME METABOLIC SURVIVAL DATA WITH PROGNOSTIC FACTORS
Data<-MSData(nPatients=100,nMet=150,Prop=0.5)
## DO THE METABOLITE BY METABOLITE ANALYSIS
Eg = MSpecificCoxPh(Survival=Data$Survival, Mdata=t(Data$Mdata),
Censor=Data$Censor, Reduce = FALSE, Select = 15,
Prognostic=Data$Prognostic, Quantile = 0.5)
## GET THE CLASS OF THE OBJECT
class(Eg) # An "ms" Class
## METHOD THAT CAN BE USED FOR THIS CLASS
show(Eg)
summary(Eg)
plot(Eg)