fcv {MetabolicSurv} | R Documentation |
Constructor for the fcv class
Description
Constructor for the fcv class
Usage
fcv(Runtime, Fold, Ncv, Nicv, TopK, HRInner, HRTest, Weight)
Arguments
Runtime |
A vector of runtime for each iteration measured in seconds. |
Fold |
Number of folds used. |
Ncv |
Number of outer cross validations used. |
Nicv |
Number of inner cross validations used. |
TopK |
The Top metabolites used |
HRInner |
A 3-way array in which first, second, and third dimensions correspond to Nicv, 1, and Ncv respectively. This contains estimated HR for low risk group on the out of bag data. |
HRTest |
A matrix of survival information for the test dataset based on the out of bag data. It has three columns representing the estimated HR, the 95% lower confidence interval and the 95% upper confidence interval. |
Weight |
A matrix with columns equals number of TopK metabolites and rows Ncv. Note that Weights are estimated as colMeans of coefficients matrix return from the inner cross validations. |
Value
object of class fcv