alpha.power.fdr |
Compute p-value threshold for given the proportion pi0 of tests with a true null |
average.power.coxph |
Compute the average power of many Cox regression models |
average.power.fisher |
Compute average power of many Fisher's exact tests |
average.power.hart |
Compute average power for RNA-seq experiments assuming Negative Binomial distribution |
average.power.li |
Compute average power for RNA-Seq experiments assuming Poisson distribution |
average.power.oneway |
Compute average power of many one-way ANOVA tests |
average.power.ranksum |
Compute average power of rank-sum tests |
average.power.signrank |
Compute average power of many signed-rank tests |
average.power.signtest |
Compute average power of many sign tests |
average.power.t.test |
Compute average power of many t-tests |
average.power.tcorr |
Compute average power of many t-tests for non-zero correlation |
average.power.twoprop |
Computer average power of many two proportion z-tests |
fdr.avepow |
Compute FDR and average power for a given sample size and effect size vector |
fdr.power.alpha |
Compute FDR for given p-value threshold, average power and proportion of tests with a true null |
find.sample.size |
Determines the sample size needed to achieve the desired FDR and average power |
n.fdr.coxph |
Sample size calculation for the Cox proportional hazards regression model |
n.fdr.fisher |
Sample size calculation for Fisher's Exact tests |
n.fdr.negbin |
Sample size calculation for Negative Binomial data |
n.fdr.oneway |
Sample size calculation for one-way ANOVA |
n.fdr.poisson |
Sample size calculation for Poisson data |
n.fdr.ranksum |
Sample size calculation for rank-sum tests |
n.fdr.signrank |
Sample size calculation for signed-rank tests |
n.fdr.signtest |
Sample size calculation for sign tests |
n.fdr.tcorr |
Sample size calculation for t-tests for non-zero correlation |
n.fdr.ttest |
Sample size calculation for t-tests |
n.fdr.twoprop |
Sample size calculation for comparing two proportions |
power.cox |
Compute the power of a single-predictor Cox regression model |
power.fisher |
Compute power for Fisher's exact test |
power.hart |
Compute power for RNA-seq experiments assuming Negative Binomial distribution |
power.li |
Compute power for RNA-Seq experiments assuming Poisson distribution |
power.oneway |
Compute power of one-way ANOVA |
power.ranksum |
Compute power of the rank-sum test |
power.signrank |
Compute power of the signed-rank test |
power.signtest |
Compute power of the sign test |
power.tcorr |
Compute power of the t-test for non-zero correlation |