Classes and Methods for "Class Comparison" Problems on
Microarrays
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Documentation for package ‘ClassComparison’ version 3.1.8
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| anova-method | Class "MultiLinearModel" |
| as.data.frame-method | Class "MultiTtest" |
| as.data.frame-method | Class "TwoGroupStats" |
| as.data.frame-method | Class "SingleGroup" |
| as.data.frame-method | Class "SmoothTtest" |
| Bum | Class "Bum" |
| Bum-class | Class "Bum" |
| BumSummary | Class "BumSummary" |
| BumSummary-class | Class "BumSummary" |
| countSignificant | Generic Methods for Significance |
| countSignificant-method | Class "Bum" |
| countSignificant-method | Generic Methods for Significance |
| countSignificant-method | Class "MultiWilcoxonTest" |
| countSignificant-method | Class "Dudoit" |
| countSignificant-method | Classes "TNoM" and "fullTNoM" |
| countSignificant-method | Class "Sam" |
| cutoffSignificant | Generic Methods for Significance |
| cutoffSignificant-method | Class "Bum" |
| cutoffSignificant-method | Generic Methods for Significance |
| cutoffSignificant-method | Class "MultiWilcoxonTest" |
| cutoffSignificant-method | Class "Dudoit" |
| Dudoit | Class "Dudoit" |
| Dudoit-class | Class "Dudoit" |
| dwil | Wilcoxon Density Function |
| fullTNoM-class | Classes "TNoM" and "fullTNoM" |
| hist-method | Class "Bum" |
| hist-method | Class "MultiTtest" |
| hist-method | Class "MultiWilcoxonTest" |
| hist-method | Class "MultiLinearModel" |
| hist-method | Classes "TNoM" and "fullTNoM" |
| image-method | Class "Bum" |
| likelihoodBum | Class "Bum" |
| MultiLinearModel | Class "MultiLinearModel" |
| MultiLinearModel-class | Class "MultiLinearModel" |
| MultiTtest | Class "MultiTtest" |
| MultiTtest-class | Class "MultiTtest" |
| MultiTtestPaired | Classes for Variant T-tests |
| MultiTtestPaired-class | Classes for Variant T-tests |
| MultiTtestUnequal | Classes for Variant T-tests |
| MultiTtestUnequal-class | Classes for Variant T-tests |
| multiTukey | Class "MultiLinearModel" |
| MultiWilcoxonTest | Class "MultiWilcoxonTest" |
| MultiWilcoxonTest-class | Class "MultiWilcoxonTest" |
| plot-method | Class "MultiTtest" |
| plot-method | Class "MultiWilcoxonTest" |
| plot-method | Class "MultiLinearModel" |
| plot-method | Class "Dudoit" |
| plot-method | Classes "TNoM" and "fullTNoM" |
| plot-method | Class "Sam" |
| plot-method | Class "TwoGroupStats" |
| plot-method | Class "SingleGroup" |
| plot-method | Class "SmoothTtest" |
| print-method | Class "TwoGroupStats" |
| print-method | Class "SingleGroup" |
| rankSum | Wilcoxon Rank-Sum Statistic |
| Sam | Class "Sam" |
| Sam-class | Class "Sam" |
| SamSummary | Class "SamSummary" |
| SamSummary-class | Class "SamSummary" |
| selectSignificant | Generic Methods for Significance |
| selectSignificant-method | Class "Bum" |
| selectSignificant-method | Generic Methods for Significance |
| selectSignificant-method | Class "MultiWilcoxonTest" |
| selectSignificant-method | Class "Dudoit" |
| selectSignificant-method | Classes "TNoM" and "fullTNoM" |
| selectSignificant-method | Class "Sam" |
| show-method | Class "BumSummary" |
| show-method | Class "TNoMSummary" |
| show-method | Class "SamSummary" |
| show-method | Class "TwoGroupStats" |
| show-method | Class "SingleGroup" |
| SingleGroup | Class "SingleGroup" |
| SingleGroup-class | Class "SingleGroup" |
| SmoothTtest | Class "SmoothTtest" |
| SmoothTtest-class | Class "SmoothTtest" |
| summary-method | Class "Bum" |
| summary-method | Class "MultiTtest" |
| summary-method | Classes for Variant T-tests |
| summary-method | Class "MultiWilcoxonTest" |
| summary-method | Class "MultiLinearModel" |
| summary-method | Classes "TNoM" and "fullTNoM" |
| summary-method | Class "Sam" |
| summary-method | Class "TwoGroupStats" |
| summary-method | Class "SingleGroup" |
| summary-method | Class "SmoothTtest" |
| TNoM | Classes "TNoM" and "fullTNoM" |
| TNoM-class | Classes "TNoM" and "fullTNoM" |
| TNoMSummary | Class "TNoMSummary" |
| TNoMSummary-class | Class "TNoMSummary" |
| TwoGroupStats | Class "TwoGroupStats" |
| TwoGroupStats-class | Class "TwoGroupStats" |
| update-method | Classes "TNoM" and "fullTNoM" |