Batch Correction of Single Cell Transcriptome Data

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Documentation for package ‘Canek’ version 0.2.5

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CheckZeroCV CheckZeroCV
CorrectBatch CorrectBatch
CorrectBatches CorrectBatches
EkfBE Correction vector estimation
Fuzzy Title Fuzzy
MeanBE MeanBE
MedianBE Correction vector estimation
PairsFiltering Title PairsFiltering
RunCanek RunCanek
RunCanek.list RunCanek
RunCanek.Seurat RunCanek
RunCanek.SingleCellExperiment RunCanek
SimBatches Dataset with simulated single cell RNA-seq from 2 batches.