Fuzzy {Canek}

Title Fuzzy

Description

Function to score cell's memberships by fuzzy logic

Usage

Fuzzy(
  cluMem = NULL,
  pcaQue = NULL,
  corCell = NULL,
  fuzzyPCA = 10,
  MST = NULL,
  verbose = FALSE
)

Arguments

cluMem

Memberships' clustering data.

pcaQue

PCA representation of the cells.

corCell

Matrix containing the initial membership assignment. Matrix dimensions are expected as #Cell x #Memberships, with each row sum equal to 1.

fuzzyPCA

Number of PCs to use in the fuzzy process.

MST

Minimum spanning tree

verbose

Print output.

Details

This function perform the fuzzification for the cells' membership. A minimum spanning tree (MST) is created among memberships, and the fuzzification is performed for each of the edges of the MST.#'