Deciphering Central Informative Nodes in Network Analysis

[Up] [Top]

Documentation for package ‘CINNA’ version 1.1.54

Help Pages

calculate_centralities Centrality measure calculation
cortex Macaque Visual Cortex Network
dangalchev_closeness_centrality Dangalchev Closeness Centrality
drugTarget Drug Target Network
giant_component_extract Giant component extraction of a graph
graph_extract_components Component extraction of a graph
group_centrality Group Centrality
harmonic_centrality Harmonic Centrality
kangaroo Kangaroo Network
local_bridging_centrality Local Bridging Centrality
misc_extract_components Component extraction of miscellaneous graph formats
pca_centralities Ranking centrality measure based on contributions
print_calculate_centralities Print computed centrality measures results into a file
print_visualize_association Print pairwise association plot among centrality measures into a file
print_visualize_correlations Print centrality correlation plot
print_visualize_dendrogram Print dendrogram plot of a graph
print_visualize_graph Print visualized based on centrality values graph
print_visualize_heatmap Print the heatmap plot of centrality measures
print_visualize_pair_correlation Print pairwise correlation and histogram plots between two centrality measures
proper_centralities Proper centrality measure representation
rhesus Moreno Rhesus Network
summary_calculate_centralities Summarize centrality measure calculation results
summary_graph_extract_components Summarize component extraction of a graph
summary_pca_centralities Summarize PCA result related to centrality measures
summary_tsne_centralities Summarize t-Distributed Stochastic Neighbor Embedding (t-SNE) on centrality measures
tsne_centralities t-Distributed Stochastic Neighbor Embedding (t-SNE) on centrality measures
visualize_association Pairwise association plot between centrality measures
visualize_correlations Correlation plot between centrality measures
visualize_dendrogram Dendrogram plot among centrality measures
visualize_graph Graph visualization based on a specific centrality measure
visualize_heatmap Heatmap plot between centrality measures
visualize_pair_correlation Pairwise correlation plot between two centrality measures
wiener_index_centrality Wiener Index Centrality
zachary Zachary Karate Club Network