Visualization of T-Cell Clonal Expansion

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Documentation for package ‘APackOfTheClones’ version 0.1.2

Help Pages

clonal_expansion_plot Visualize T cell clonal expansion with a ball-packing plot.
count_clone_sizes count the number of clonotype sizes per cell cluster in a seurat object integrated with a TCR library
integrate_tcr Integrate a TCR library into Seurat object metadata
mini_clonotype_data Artificially generated T cell receptor library
mini_seurat_obj Artificially generated Seurat object