getApotcDataIds {APackOfTheClones} | R Documentation |
Get all run ids of previous RunAPOTC runs on a seurat object
Description
A convenience function to get all run ids of previous RunAPOTC run IDs
Usage
getApotcDataIds(seurat_obj)
Arguments
seurat_obj |
a seurat object that has had RunAPOTC ran on it before in order of the functions being called. |
Value
a character vector of all run ids of previous RunAPOTC runs, in
the order they were ran in. If there are no runs on the object, it returns
NULL
.
Examples
pbmc <- RunAPOTC(
seurat_obj = get(data("combined_pbmc")),
reduction_base = "umap",
clonecall = "strict",
verbose = FALSE
)
getApotcDataIds(pbmc)
#> [1] "umap;CTstrict;_;_"
pbmc <- RunAPOTC(
seurat_obj = pbmc,
reduction_base = "umap",
clonecall = "gene",
verbose = FALSE
)
getApotcDataIds(pbmc)
#> [1] "umap;CTstrict;_;_" "umap;CTgene;_;_"
[Package APackOfTheClones version 1.2.0 Index]