| genoSxT {wgaim} | R Documentation |
Genotypic marker data for Sunco x Tasman doubled haploid population in R/qtl format
Description
Linkage map marker data for the Sunco x Tasman doubled haploid population in the form of an R/qtl cross object.
Usage
data(phenoSxT)Format
This data relates to a linkage map of 287 genetic markers genotyped on 190
individuals from the Sunco x Tasman population. This set is reduced from
the original 345 markers (a mixture of AFLP, RFLP and microsatellite
markers and protein analysis). The reduction was created by discarding
58 markers which were co-located with one or more other markers. The
linkage map consists of 21 linkage groups with varying numbers of
markers. Map distances have been estimated using read.cross()
with the kosambi mapping function. The data is therefore an R/qtl
cross object. See read.cross() documentation for more details on the
format of this object.
Examples
data(genoSxT, package = "wgaim")
linkMap(genoSxT, cex = 0.5)