plot.SDMfit {webSDM} | R Documentation |
Plots the regression coefficients of a local model
Description
Plots the regression coefficients of a local SDMfit model
Usage
## S3 method for class 'SDMfit'
plot(x, level = 0.95, ...)
Arguments
x |
A SDMfit object, typically obtained with trophicSDM() and available in the field $model of a trophicSDMfit object |
level |
the confidence level of the confidence intervals |
... |
additional arguments |
Value
A plot of the regression coefficients of the fitted local SDM
Author(s)
Giovanni Poggiato
Examples
data(Y, X, G)
# define abiotic part of the model
env.formula = "~ X_1 + X_2"
# Run the model with bottom-up control using stan_glm as fitting method and no penalisation
# (set iter = 1000 to obtain reliable results)
m = trophicSDM(Y, X, G, env.formula, iter = 50,
family = binomial(link = "logit"), penal = NULL,
mode = "prey", method = "stan_glm")
# Plot species Y6
plot(m$model$Y6)
[Package webSDM version 1.1-5 Index]