buildFormula |
Builds SDM formulae |
coef.SDMfit |
Gets regression coefficients from a local model, i.e. a SDMfit object. |
coef.trophicSDMfit |
Gets regression coefficients from a fitted trophicSDM model. |
computeVariableImportance |
Computes variable importance of (groups of) variables of fitted a trophicSDM model. |
evaluateModelFit |
Evaluates prediction goodness of fit |
G |
Simulated environemntal covariates G |
global |
Global |
loo.trophicSDMfit |
Computes an approximation of loo for the whole model |
plot.SDMfit |
Plots the regression coefficients of a local model |
plot.trophicSDMfit |
Plots the regression coefficients of a fitted trophicSDM model |
plotG |
Plots the metaweb G |
plotG_inferred |
Plot the metaweb G according to the inferred coefficients |
predict.SDMfit |
Predicts with a local model |
predict.trophicSDMfit |
Computes predicted values from the fitted trophicSDMfit model |
predictPotential |
Predicts species potential niche |
print.SDMfit |
Prints a SDMfit object |
print.trophicSDMfit |
Prints a fitted trophicSDM model |
SDMfit |
Fitting a single-species SDM |
summary.SDMfit |
Summary of a fitted SDMfit model |
summary.trophicSDMfit |
Summary of a fitted trophicSDM model |
trophicSDM |
Fitting a trophic Species distribution model |
trophicSDM_CV |
Compute K-fold cross-validation predicted values from a fitted trophicSDM model |
X |
Simulated environmental covariates X |
Y |
Simulated species distribution Y |