wallace-package |
_Wallace_: A modular platform for reproducible ecological modeling |
create_module |
Create a Wallace module |
ecoClimate_getdata |
ecoClimate_getdata |
ecoClimate_select |
ecoClimate_select |
envs_ecoClimate |
envs_ecoClimate Obtain ecoClimate variables |
envs_userEnvs |
envs_userEnvs |
envs_worldclim |
envs_worldclim Obtain WorldClim variables |
espace_nicheOv |
espace_nicheOv Niche Overlap |
espace_occDens |
Occurrence density grid |
espace_pca |
espace_pca Principal component analysis |
model_bioclim |
model_bioclim Generate Bioclim model |
model_maxent |
model_maxent Generate maxent.jar or maxnet model |
occs_queryDb |
occs_queryDb Query online database for species occurrence records. |
occs_userOccs |
occs_userOccs Loads user provided occurrence records |
part_partitionOccs |
part_partitionOccs Partition occurrence data |
penvs_bgExtent |
penvs_bgExtent Generate background extent |
penvs_bgMask |
penvs_bgMask Mask environmental data |
penvs_bgSample |
penvs_bgSample Sample background points |
penvs_drawBgExtent |
penvs_drawBgExtent: Draw background extent |
penvs_userBgExtent |
penvs_userBgExtent: user provided background extent |
poccs_removeByID |
poccs_removeByID Remove occurrence by ID |
poccs_selectOccs |
poccs_selectOccs Remove occurrences outside of polygon |
poccs_thinOccs |
poocs_thinOccs Thin occurrences |
register_module |
Register a Wallace module |
run_wallace |
Run _Wallace_ Application |
vis_bioclimPlot |
vis_bioclimPlot Visualize bivariate plot of BIOCLIM model |
wallace |
_Wallace_: A modular platform for reproducible ecological modeling |
xfer_area |
xfer_area Transfer model to a new area |
xfer_draw |
xfer_draw Draw extent of transfer |
xfer_mess |
xfer_mess generate MESS map for transferred raster |
xfer_time |
xfer_time Transfer model to a new time |
xfer_userEnvs |
xfer_userEnvs Transfer model to user specified area and time |
xfer_userExtent |
xfer_userExtent: user provided extent of transfer |