Quantify the Contractile Nature of Vessels Monitored under an Operating Microscope

Documentation for package ‘vmeasur’ version 0.1.4

calibrate_pixel_size	Calibrate the pixel size using a test image
example_vessel	Example lymphatic width dataset
output_dir	Set the output directory
quantify_directory	Quantify the content of an entire directory of sub-directories at once
quantify_mean_width	Quantify the vessel width over an entire ROI
quantify_mean_width_sections	Quantify the contractility of a vessel in sections along it's length
quantify_width_position	Quantify the width of a vessel continuously along it's length
scratch_dir	Set the scratch directory for vmeasur
select_roi	Select a ROI from a video file
threshold_apply	Threshold a video with pre-determined parameters
threshold_vessel	Apply a threshold to a single frame