Trees and Traits Simulations
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Documentation for package ‘treats’ version 1.0
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| age.condition | events.conditions |
| bd.params.update | Events modifications |
| BM.process | Trait processes |
| branch.length | Modifiers |
| branch.length.trait | Modifiers |
| crude.bd.est | Crudely estimates extinction and speciation |
| discrete.process | Trait processes |
| dispRitreats | dispRity interface for treats objects |
| drop.fossils | Drop things from a treats object |
| drop.livings | Drop things from a treats object |
| drop.singles | Drop things from a treats object |
| drop.things | Drop things from a treats object |
| events.condition | events.conditions |
| events.conditions | events.conditions |
| events.modification | Events modifications |
| events.modifications | Events modifications |
| founding.event | Events modifications |
| make.bd.params | Make birth death parameters |
| make.events | make.events |
| make.modifiers | make.modifiers |
| make.traits | make.traits |
| make.treats | Make a treats object |
| map.traits | Maps a trait on a tree |
| modifiers | Modifiers |
| modifiers.update | Events modifications |
| multi.peak.process | Trait processes |
| no.process | Trait processes |
| OU.process | Trait processes |
| parent.traits | Get parent traits |
| plot.treats | Plot treats objects |
| print.treats | Prints a 'treats' object. |
| random.extinction | Events modifications |
| repulsion.process | Trait processes |
| selection | Modifiers |
| speciation | Modifiers |
| speciation.trait | Modifiers |
| taxa.condition | events.conditions |
| trait.condition | events.conditions |
| trait.extinction | Events modifications |
| trait.process | Trait processes |
| traits.update | Events modifications |
| transition.matrix | Makes a transition matrix |
| treats | Diversity and disparity simulator |