tip_or {tipr} | R Documentation |
Tip an observed odds ratio with a normally distributed confounder.
Description
choose one of the following, and the other will be estimated:
-
exposure_confounder_effect
-
confounder_outcome_effect
Usage
tip_or(
effect_observed,
exposure_confounder_effect = NULL,
confounder_outcome_effect = NULL,
verbose = getOption("tipr.verbose", TRUE),
or_correction = FALSE
)
tip_or_with_continuous(
effect_observed,
exposure_confounder_effect = NULL,
confounder_outcome_effect = NULL,
verbose = getOption("tipr.verbose", TRUE),
or_correction = FALSE
)
Arguments
effect_observed |
Numeric positive value. Observed exposure - outcome odds ratio. This can be the point estimate, lower confidence bound, or upper confidence bound. |
exposure_confounder_effect |
Numeric. Estimated difference in scaled means between the unmeasured confounder in the exposed population and unexposed population |
confounder_outcome_effect |
Numeric positive value. Estimated relationship between the unmeasured confounder and the outcome |
verbose |
Logical. Indicates whether to print informative message.
Default: |
or_correction |
Logical. Indicates whether to use a correction factor.
The methods used for this function are based on risk ratios. For rare
outcomes, an odds ratio approximates a risk ratio. For common outcomes,
a correction factor is needed. If you have a common outcome (>15%),
set this to |
Value
Data frame.
Examples
## to estimate the relationship between an unmeasured confounder and outcome
## needed to tip analysis
tip_or(1.2, exposure_confounder_effect = -2)
## to estimate the number of unmeasured confounders specified needed to tip
## the analysis
tip_or(1.2, exposure_confounder_effect = -2, confounder_outcome_effect = .99)
## Example with broom
if (requireNamespace("broom", quietly = TRUE) &&
requireNamespace("dplyr", quietly = TRUE)) {
glm(am ~ mpg, data = mtcars, family = "binomial") %>%
broom::tidy(conf.int = TRUE, exponentiate = TRUE) %>%
dplyr::filter(term == "mpg") %>%
dplyr::pull(conf.low) %>%
tip_or(confounder_outcome_effect = 2.5, or_correction = TRUE)
}