taxizedb-package |
taxizedb |
children |
Retrieve immediate descendents of a taxon |
classification |
Retrieve the taxonomic hierarchies from local database |
db_download |
Download taxonomic databases |
db_download_col |
Download taxonomic databases |
db_download_gbif |
Download taxonomic databases |
db_download_itis |
Download taxonomic databases |
db_download_ncbi |
Download taxonomic databases |
db_download_tpl |
Download taxonomic databases |
db_download_wfo |
Download taxonomic databases |
db_download_wikidata |
Download taxonomic databases |
db_load-defunct |
Load taxonomic databases - NO LONGER NEEDED |
db_load_col |
Load taxonomic databases - NO LONGER NEEDED |
db_load_gbif |
Load taxonomic databases - NO LONGER NEEDED |
db_load_itis |
Load taxonomic databases - NO LONGER NEEDED |
db_load_ncbi |
Load taxonomic databases - NO LONGER NEEDED |
db_load_tpl |
Load taxonomic databases - NO LONGER NEEDED |
db_load_wikidata |
Load taxonomic databases - NO LONGER NEEDED |
db_path |
database path |
downstream |
Retrieve all taxa descending from a vector of taxa |
name2taxid |
Convert species names to taxon IDs |
sql_collect |
Query and get data back into a data.frame |
src_col |
src - dplyr src objects |
src_gbif |
src - dplyr src objects |
src_itis |
src - dplyr src objects |
src_ncbi |
src - dplyr src objects |
src_taxizedb |
src - dplyr src objects |
src_tpl |
src - dplyr src objects |
src_wfo |
src - dplyr src objects |
src_wikidata |
src - dplyr src objects |
taxa_at |
Get taxa at specific scientific ranks |
taxid2name |
Convert taxon IDs to scientific names |
taxid2rank |
Convert taxon IDs to scientific ranks |
taxizedb |
taxizedb |
tdb_cache |
Caching |