apg_lookup {taxize} | R Documentation |
Lookup in the APGIII taxonomy and replace family names
Description
Lookup in the APGIII taxonomy and replace family names
Usage
apg_lookup(taxa, rank = "family")
Arguments
taxa |
(character) Taxonomic name to lookup a synonym for in APGIII taxonomy. |
rank |
(character) Taxonomic rank to lookup a synonym for. One of family or order. |
Details
Internally in this function, we use the datasets apg_families
and apg_orders - see their descriptions for the data in them.
The functions apgOrders()
apgFamilies()
are for scraping
current content from the http://www.mobot.org/MOBOT/research/APweb/
website
The datasets used in this function are from the most recent version of APGIII, Version 14 (http://www.mobot.org/MOBOT/research/APweb/)
Value
A APGIII family or order name, the original name if the name is the same as APG has, or NA if no match found
Examples
# New name found
apg_lookup(taxa = "Hyacinthaceae", rank = "family")
# Name is the same
apg_lookup(taxa = "Poaceae", rank = "family")
apg_lookup(taxa = "Asteraceae", rank = "family")
# Name not found
apg_lookup(taxa = "Foobar", rank = "family")
# New name found
apg_lookup(taxa = "Acerales", rank = "order")
# Name is the same
apg_lookup(taxa = "Acorales", rank = "order")
# Name not found
apg_lookup(taxa = "Foobar", rank = "order")
[Package taxize version 0.9.100 Index]