tapnet-package |
tapnet: A package for fitting, and predicting from, bipartite interaction networks. |
fit_tapnet |
Fit the tapnet model to a network |
functions |
Helper functions for tapnet |
gof_tapnet |
Goodness-of-fit of a tapnet fit |
helper |
Helper functions for tapnet |
humm_abun |
Hummingbird-flower networks |
humm_traits |
Hummingbird-flower networks |
humm_tree |
Hummingbird-flower networks |
internalFunctions |
Helper functions for tapnet |
latent_cor |
Helper functions for tapnet |
loglik_tapnet |
Helper functions for tapnet |
make_tapnet |
Constructs an object of type "tapnet" |
networks |
Hummingbird-flower networks |
param_vec2list |
Helper functions for tapnet |
pems_from_tree |
Helper functions for tapnet |
plant_abun |
Hummingbird-flower networks |
plant_traits |
Hummingbird-flower networks |
plant_tree |
Hummingbird-flower networks |
predict_tapnet |
Predict from fitted tapnet to new data |
refit_params |
Helper functions for tapnet |
select_relevant_pems |
Helper functions for tapnet |
simnetfromtap |
Simulates a network from parameters, abundances, traits and phylogeny provided |
simulate_tapnet |
Creates a simulated along with all parameters, abundances, traits and phylogeny used |
tapnet2df |
Convert tapnet object into data.frame |
Tinoco |
Hummingbird-flower networks |
tmatch |
Helper functions for tapnet |
web_indices |
Helper functions for tapnet |