BWR {speaq} | R Documentation |
BW ratio calculation
Description
Compute the BW ratios from data groups
Usage
BWR(X, groupLabel)
Arguments
X |
The spectral dataset in the matrix format in which each row contains a single sample. |
groupLabel |
Group label of samples in the dataset. |
Value
Return BW ratio
Author(s)
Trung Nghia Vu
See Also
Examples
res=makeSimulatedData();
X=res$data;
groupLabel=res$label;
peakList <- detectSpecPeaks(X,
nDivRange = c(128),
scales = seq(1, 16, 2),
baselineThresh = 50000,
SNR.Th = -1,
verbose=FALSE
);
resFindRef<- findRef(peakList);
refInd <- resFindRef$refInd;
maxShift = 50;
Y <- dohCluster(X,
peakList = peakList,
refInd = refInd,
maxShift = maxShift,
acceptLostPeak = TRUE, verbose=FALSE);
# find the BW-statistic
BW = BWR(Y, groupLabel);
[Package speaq version 2.7.0 Index]