datasets {sparseR}

Data sets

Description

Detrano data sets (cleveland, hungarian, switzerland, va); The Iowa Radon Lung Cancer Study (irlcs_radon_syn): Data simulated to resemble the IRLCS study; Sheddon survival data (Z: clinical covariates, S:survival outcome)

Usage

cleveland

hungarian

switzerland

va

irlcs_radon_syn

Z

S

Format

An object of class data.frame with 303 rows and 14 columns.

An object of class data.frame with 294 rows and 14 columns.

An object of class data.frame with 123 rows and 14 columns.

An object of class data.frame with 200 rows and 14 columns.

An object of class data.frame with 1027 rows and 16 columns.

An object of class data.frame with 442 rows and 6 columns.

An object of class Surv with 442 rows and 2 columns.

Source

Detrano data

https://archive.ics.uci.edu/ml/datasets/heart+disease

IRLCS data sets

https://cheec.uiowa.edu/research/residential-radon-and-lung-cancer-case-control-study

Sheddon

https://www.gsea-msigdb.org/gsea/msigdb/cards/SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6

References

Detrano

Detrano, R., Janosi, A., Steinbrunn, W., Pfisterer, M., Schmid, J., Sandhu, S., Guppy, K., Lee, S., & Froelicher, V. (1989). International application of a new probability algorithm for the diagnosis of coronary artery disease. American Journal of Cardiology, 64,304–310.

IRLCS

FIELD, R., SMITH, B., STECK, D. et al. Residential radon exposure and lung cancer: Variation in risk estimates using alternative exposure scenarios. J Expo Sci Environ Epidemiol 12, 197–203 (2002). https://www.nature.com/articles/7500215

Shedden

Director's Challenge Consortium for the Molecular Classification of Lung Adenocarcinoma, Shedden, K., Taylor, J. M., Enkemann, S. A., Tsao, M. S., Yeatman, T. J., Gerald, W. L., Eschrich, S., Jurisica, I., Giordano, T. J., Misek, D. E., Chang, A. C., Zhu, C. Q., Strumpf, D., Hanash, S., Shepherd, F. A., Ding, K., Seymour, L., Naoki, K., Pennell, N., … Beer, D. G. (2008). Gene expression-based survival prediction in lung adenocarcinoma: a multi-site, blinded validation study. Nature medicine, 14(8), 822–827. https://www.nature.com/articles/nm.1790