spsample {sp}

sample point locations in (or on) a spatial object

Description

sample point locations within a square area, a grid, a polygon, or on a spatial line, using regular or random sampling methods; the methods used assume that the geometry used is not spherical, so objects should be in planar coordinates

Usage

spsample(x, n, type, ...)
makegrid(x, n = 10000, nsig = 2, cellsize, offset = rep(0.5, nrow(bb)),
	pretty = TRUE)

Arguments

x

Spatial object; spsample(x,...) is a generic method for the existing sample.Xxx functions

...

optional arguments, passed to the appropriate sample.Xxx functions; see NOTES for nclusters and iter

n

(approximate) sample size

type

character; "random" for completely spatial random; "regular" for regular (systematically aligned) sampling; "stratified" for stratified random (one single random location in each "cell"); "nonaligned" for nonaligned systematic sampling (nx random y coordinates, ny random x coordinates); "hexagonal" for sampling on a hexagonal lattice; "clustered" for clustered sampling; "Fibonacci" for Fibonacci sampling on the sphere (see references).

bb

bounding box of the sampled domain; setting this to a smaller value leads to sub-region sampling

offset

for square cell-based sampling types (regular, stratified, nonaligned, hexagonal): the offset (position) of the regular grid; the default for spsample methods is a random location in the unit cell [0,1] x [0,1], leading to a different grid after each call; if this is set to c(0.5,0.5), the returned grid is not random (but, in Ripley's wording, "centric systematic"). For line objects, a single offset value is taken, where the value varies within the [0, 1] interval, and 0 is the beginning of each Line object, and 1 its end

cellsize

if missing, a cell size is derived from the sample size n; otherwise, this cell size is used for all sampling methods except "random"

nsig

for "pretty" cell size; spsample does not result in pretty grids

pretty

logical; if TRUE, choose pretty (rounded) coordinates

Value

an object of class SpatialPoints-class. The number of points is only guaranteed to equal n when sampling is done in a square box, i.e. (sample.Spatial). Otherwise, the obtained number of points will have expected value n.

When x is of a class deriving from Spatial-class for which no spsample-methods exists, sampling is done in the bounding box of the object, using spsample.Spatial. An overlay using over may be necessary to select the features inside the geometry afterwards.

Sampling type "nonaligned" is not implemented for line objects.

Some methods may return NULL if no points could be successfully placed.

makegrid makes a regular grid that covers x; when cellsize is not given it derives one from the number of grid points requested (approximating the number of cells). It tries to choose pretty cell size and grid coordinates.

Methods

x = "Spatial"

sample in the bbox of x

x = "Line"

sample on a line

x = "Polygon"

sample in a Polygon

x = "Polygons"

sample in a Polygons object, consisting of possibly multiple Polygon objects (holes must be correctly defined, use checkPolygonsHoles if need be)

x = "SpatialPolygons"

sample in an SpatialPolygons object; sampling takes place over all Polygons objects present, use subsetting to vary sampling intensity (density); holes must be correctly defined, use checkPolygonsHoles if need be

x = "SpatialGrid"

sample in an SpatialGrid object

x = "SpatialPixels"

sample in an SpatialPixels object

Note

If an Polygon-class object has zero area (i.e. is a line), samples on this line element are returned. If the area is very close to zero, the algorithm taken here (generating points in a square area, selecting those inside the polygon) may be very resource intensive. When numbers of points per polygon are small and type="random", the number searched for is inflated to ensure hits, and the points returned sampled among these.

The following two arguments can be further specified:

nclusters Number of clusters (strata) to sample from.

iter(default = 4) number of times to try to place sample points in a polygon before giving up and returning NULL - this may occur when trying to hit a small and awkwardly shaped polygon in a large bounding box with a small number of points

Author(s)

Edzer Pebesma, [e-mail]

References

Chapter 3 in B.D. Ripley, 1981. Spatial Statistics, Wiley

Fibonacci sampling: Alvaro Gonzalez, 2010. Measurement of Areas on a Sphere Using Fibonacci and Latitude-Longitude Lattices. Mathematical Geosciences 42(1), p. 49-64

See Also

over, point.in.polygon, sample

Examples

data(meuse.riv)
meuse.sr = SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "x")))

plot(meuse.sr)
points(spsample(meuse.sr, n = 1000, "regular"), pch = 3)

plot(meuse.sr)
points(spsample(meuse.sr, n = 1000, "random"), pch = 3)

plot(meuse.sr)
points(spsample(meuse.sr, n = 1000, "stratified"), pch = 3)

plot(meuse.sr)
points(spsample(meuse.sr, n = 1000, "nonaligned"), pch = 3)

plot(meuse.sr)
points(spsample(meuse.sr@polygons[[1]], n = 100, "stratified"), pch = 3, cex=.5)

data(meuse.grid)
gridded(meuse.grid) = ~x+y
image(meuse.grid)
points(spsample(meuse.grid,n=1000,type="random"), pch=3, cex=.5)
image(meuse.grid)
points(spsample(meuse.grid,n=1000,type="stratified"), pch=3, cex=.5)
image(meuse.grid)
points(spsample(meuse.grid,n=1000,type="regular"), pch=3, cex=.5)
image(meuse.grid)
points(spsample(meuse.grid,n=1000,type="nonaligned"), pch=3, cex=.5)

fullgrid(meuse.grid) = TRUE
image(meuse.grid)
points(spsample(meuse.grid,n=1000,type="stratified"), pch=3,cex=.5)