contrMat {simboot} | R Documentation |
Contrast Matrices
Description
Computes contrast matrices for several multiple comparison procedures.
Usage
contrMat(n, type = c("Dunnett", "Tukey", "Sequen", "AVE",
"Changepoint", "Williams", "Marcus",
"McDermott", "UmbrellaWilliams", "GrandMean"),
base = 1)
Arguments
n |
a (possibly named) vector of sample sizes for each group. |
type |
type of contrast. |
base |
an integer specifying which group is considered the baseline group for Dunnett contrasts. |
Details
Computes the requested matrix of contrasts for comparisons of mean levels.
Value
The matrix of contrasts with appropriate row names is returned.
Note
Function contrMat
is adapted from package multcomp
References
Frank Bretz, Alan Genz and Ludwig A. Hothorn (2001), On the numerical availability of multiple comparison procedures. Biometrical Journal, 43(5), 645–656.
Examples
n <- c(10,20,30,40)
names(n) <- paste("group", 1:4, sep="")
contrMat(n) # Dunnett is default
contrMat(n, base = 2) # use second level as baseline
contrMat(n, type = "Tukey")
contrMat(n, type = "Sequen")
contrMat(n, type = "AVE")
contrMat(n, type = "Changepoint")
contrMat(n, type = "Williams")
contrMat(n, type = "Marcus")
contrMat(n, type = "McDermott")
### Umbrella-protected Williams contrasts, i.e. a sequence of
### Williams-type contrasts with groups of higher order
### stepwise omitted
contrMat(n, type = "UmbrellaWilliams")
### comparison of each group with grand mean of all groups
contrMat(n, type = "GrandMean")
[Package simboot version 0.2-8 Index]