filter_correlation {sccca}

Filter the genes based on specific correlation threshold

Description

This Function is used to filter the gene correlation matrix based on user-defined threshold

Usage

filter_correlation(cor_mat, gene_list, threshold = 0.7)

Arguments

cor_mat

correlation matrix generated from calculate_cor_mat function.

gene_list

cell markers that passed threshold.

threshold

absolute correlation threshold.

Value

vector of gene names that pass user-defined correlation threshold.

Author(s)

Mohmed Soudy [e-mail] and Sohpie LE BARS [e-mail] and Enrico Glaab [e-mail]