Statistical Catch-at-Age Plotting Environment


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Documentation for package ‘scape’ version 2.3.3

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scape-package Statistical Catch-at-Age Plotting Environment
estN Estimate Effective Sample Size
estN.int Estimate Effective Sample Size
estSigmaI Estimate Abundance Index Sigma
estSigmaR Estimate Recruitment Sigma
getN Extract Sample Size
getSigmaI Extract Abundance Index Sigma
getSigmaR Extract Recruitment sigma
importADCAM Import ADCAM Model Results
importCol Import Coleraine Model Results
importMCMC Import Coleraine MCMC Results
importProj Import Coleraine MCMC Projections
iterate Get Candidate Sigmas and Sample Sizes
plotB Plot Biomass, Recruitment, and Landings
plotCA Plot Catch at Age
plotCL Plot Catch at Length
plotIndex Plot Abundance Index
plotLA Plot Length at Age
plotN Plot Numbers at Age
plotSel Plot Selectivity and Maturity
scape Statistical Catch-at-Age Plotting Environment
x.cod Cod Assessment
x.ling Ling Assessment
x.oreo Oreo Assessment
x.saithe Saithe Assessment
x.sbw Whiting Assessment
xmcmc MCMC Results from Cod Assessment
xproj MCMC Projections from Cod Assessment