BuildNetwork {scDiffCom} | R Documentation |
Display cell-type to cell-type interactive networks
Description
Create and plot an interactive network that summarize how cell-types and their interactions are over-represented.
Usage
BuildNetwork(
object,
network_type = c("ORA_network"),
layout_type = c("bipartite", "conventional"),
abbreviation_table = NULL
)
## S4 method for signature 'scDiffCom'
BuildNetwork(
object,
network_type = c("ORA_network"),
layout_type = c("bipartite", "conventional"),
abbreviation_table = NULL
)
Arguments
object |
|
network_type |
Type of network to display. Currently, only
|
layout_type |
Layout of the network to display. Can either be
|
abbreviation_table |
Table with abbreviations
for the cell types present in the |
Value
A visNetwork object.
[Package scDiffCom version 1.0.0 Index]