ruv_projectionplot {ruv}

RUV Projection Plot

Description

Projection plot of an RUV regression fit.

Usage

ruv_projectionplot(fit, X.col = 1, factor = "gradient", adjusted = TRUE)

Arguments

fit

The results of a call to ruv_summary.

X.col

Which column of the X matrix to make the plot for. Can be either an integer or a character string.

factor

Which unwanted factor to use (horizontal axis). Must be either an integer or the character string "gradient".

adjusted

Whether the plot should be adjusted for unwanted factors other than the one being plotted. Not relevant when factor = "gradient".

Value

A ggplot.

Author(s)

Johann Gagnon-Bartsch