ruv_hist {ruv}

RUV P-value Histogram Plot

Description

Plots a histogram of p-values returned by a call to ruv_summary

Usage

ruv_hist(fit, X.col = "all", breaks = c(0, 0.001, 0.01, 0.05, seq(0.1, 1, by = 0.1)))

Arguments

fit

The results of a call to ruv_summary.

X.col

Which column of the X matrix to make the plot for, i.e. which factor's p-values to plot. Can be either an integer or a character string. Or, if "all" (the default), use the F-test p-values.

breaks

Breakpoints of the histogram.

Value

A ggplot.

Author(s)

Johann Gagnon-Bartsch