refseqR-package |
refseqR: Common computational operations working with RefSeq |
extract_from_xm |
Extract some features from an XM accession |
refseqR |
refseqR: Common computational operations working with RefSeq |
refseq_AAseq |
Extract the amino acid sequence into a Biostrings object |
refseq_AA_length |
Get the amino acid length from a protein accession |
refseq_AA_mol_wt |
Extract the molecular weight from a protein accession |
refseq_CDScoords |
Extract the coding sequences (CDS) coordinates from a transcript accession |
refseq_CDSseq |
Extract the CDS nucleotide sequence into a Biostrings object |
refseq_description |
Get the sequence Description |
refseq_fromGene |
Get the mRNA or protein accession |
refseq_GeneID |
Get the GeneID |
refseq_mRNA2protein |
Get the XP accession from XM accession |
refseq_mRNAfeat |
Get mRNA features |
refseq_protein2mRNA |
Get the transcript accession from the protein accession |