parse_fasta_text_to_list {rPDBapi}R Documentation

Parse Raw FASTA Text into a List of Sequences

Description

This function parses raw FASTA text into a structured list format. It splits the FASTA text into individual sequences and extracts relevant information like entity ID, chains, sequence, and header.

Usage

parse_fasta_text_to_list(raw_fasta_text)

Arguments

raw_fasta_text

A string containing the raw FASTA text to be parsed.

Value

A list of FASTA sequences, each as a separate list element with entity ID, chains, sequence, and header.

Examples

raw_fasta_text <- ">1XYZ|Chains A, B\nMVLSPADKT...\n>2XYZ|Chain C\nGVLSADFT..."
fasta_list <- parse_fasta_text_to_list(raw_fasta_text)

[Package rPDBapi version 1.2 Index]