| ADtable {rCNV} | R Documentation |
Allele Depth (AD) example data
Description
Example SNPs data of Chinook Salmon from Larson et al. et al. 2014. The data contains only a partial snps data set of RadSeq data after filtering.
Usage
data(ADtable)
Format
An object of class data.frame with 3000 rows and 109 columns.
References
Larson, W. A., Seeb, L. W., Everett, M. V., Waples, R. K., Templin, W. D., & Seeb, J. E. (2014). Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha). Evolutionary Applications, 7(3), 355-369.
McKinney, G. J., Waples, R. K., Seeb, L. W., & Seeb, J. E. (2017). Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping by sequencing data from natural populations. Molecular Ecology Resources, 17(4)
[Package rCNV version 1.2.0 Index]