probs_qtl2_to_array {qtl2convert} | R Documentation |
Convert R/qtl2 genotype probabilities to a 3d array
Description
Convert R/qtl2 genotype probabilities to a 3d array
Usage
probs_qtl2_to_array(probs)
Arguments
probs |
A |
Details
We convert just the autosomal genotype probabilities, because they should all have the same number of genotypes (columns). The main application of this is for identifying possible sample mix-ups among batches of genotype probabilities (e.g., using the R/lineup2 package), and for this the autosomal genotype probabilities should be sufficient.
Value
A single three-dimensional array, with just the autosomal genotype probabilities.
[Package qtl2convert version 0.30 Index]