renum.pdb {ptm}

Renumerate Residue Position

Description

Renumerates residue position of a PDB sequence to match the corresponding UniProt sequence.

Usage

renum.pdb(pdb, chain, uniprot)

Arguments

pdb

the PDB ID or the path to a pdb file.

chain

the chain of interest.

uniprot

the UniProt ID.

Value

Returns a dataframe containing the re-numerated sequence.

Author(s)

Juan Carlos Aledo

See Also

is.at(), aa.at(), renum.meto(), renum(), aa.compo()

Examples

## Not run: renum.pdb(pdb = '121P', chain = 'A', uniprot = 'P01112')