get.seq {ptm}

Import a Protein Sequence from a Database

Description

Imports a protein sequence from a selected database.

Usage

get.seq(id, db = 'uniprot', as.string = TRUE)

Arguments

id

the identifier of the protein of interest.

db

a character string specifying the desired database; it must be one of 'uniprot' or 'metosite'.

as.string

logical, if TRUE the imported sequence will be returned as a character string.

Details

MetOSite uses the same type of protein ID than UniProt.

Value

Returns a protein sequence either as a character vector or a as a character string.

Examples

get.seq('P01009')