get.area {ptm} | R Documentation |
Atomic Solvation Energies.
Description
Computes online surface energies using the Getarea server.
Usage
get.area(pdb, keepfiles = FALSE)
Arguments
pdb |
is either a PDB id, or the path to a pdb file. |
keepfiles |
logical, if TRUE the dataframe will be saved in the working directory and we will keep the getarea txt file. |
Details
If the option keepfiles is set as TRUE, then txt and Rda files are saved in the working directory.
Value
This function returns a dataframe containing the requested information.
Author(s)
Juan Carlos Aledo
References
Fraczkiewicz, R. and Braun, W. (1998) J. Comp. Chem., 19, 319-333.
See Also
compute.dssp(), atom.dpx(), res.dpx(), acc.dssp(), str.part()
Examples
## Not run: get.area('3cwm')
[Package ptm version 0.2.7 Index]