myparams {poolABC}R Documentation

Matrix of simulated parameter values

Description

This data set contains a matrix of simulated parameter values. These parameter values were sampled from prior distributions and used to perform simulations under a isolation with migration model with two populations. Each row of this matrix corresponds to a different simulation.

Usage

myparams

Format

a matrix with 5000 rows and 8 columns:

N1

relative size of the first population. This population corresponds to the C ecotype.

N2

relative size of the second population. This population corresponds to the W ecotype.

Split

time, in 4Nref scale, of the split event that creates the two populations.

PoolError

error associated with DNA pooling.

SeqError

error associated with DNA sequencing.

mCW

migration rate between the two divergent ecotypes This is the migration rate from ecotype C to ecotype W.

mWC

migration rate between the two divergent ecotypes This is the migration rate from ecotype W to ecotype C.

pM

proportion of the genome with no barriers against gene flow. This is the proportion of simulated loci where migration occurs in both directions between the divergent ecotypes.

Source

simulations performed


[Package poolABC version 1.0.0 Index]