Presence-Only for Marked Point Process

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Documentation for package ‘pompp’ version 0.1.3

• DESCRIPTION file.

Help Pages

$-method	Gamma prior class for the LambdaStar parameter.
$-method	Normal prior class for Beta and Delta parameters.
$-method	Class for the result of the MCMC procedure.
$-method	Class for the initial values for the MCMC for the pompp package
$-method	Class that defines a model for the pompp package.
$-method	Joint prior class for the pompp package parameters
$<--method	Gamma prior class for the LambdaStar parameter.
$<--method	Normal prior class for Beta and Delta parameters.
$<--method	Class that defines a model for the pompp package.
$<--method	Joint prior class for the pompp package parameters
*-method	Class for the initial values for the MCMC for the pompp package
+-method	Class for the result of the MCMC procedure.
+-method	Class for the initial values for the MCMC for the pompp package
as.array-method	Class for the result of the MCMC procedure.
as.array.pompp_fit	Class for the result of the MCMC procedure.
as.data.frame-method	Class for the result of the MCMC procedure.
as.data.frame.pompp_fit	Class for the result of the MCMC procedure.
as.matrix-method	Class for the result of the MCMC procedure.
as.matrix.pompp_fit	Class for the result of the MCMC procedure.
barplot.covariates_importance	Class for covariates importance matrices
BetaDeltaPrior-class	Generic class for the beta and delta parameters.
boxplot.covariates_importance	Class for covariates importance matrices
c-method	Class for the result of the MCMC procedure.
checkFormatBackground	Fit presence-only data using the Presence-Only for Marked Point Process model
covariates_importance-class	Class for covariates importance matrices
fit_pompp	Fit presence-only data using the Presence-Only for Marked Point Process model
fit_pompp-method	Fit presence-only data using the Presence-Only for Marked Point Process model
GammaPrior	Create a Gamma prior object for model specification.
GammaPrior-class	Gamma prior class for the LambdaStar parameter.
initial	Initial values constructor for pompp modeling
LambdaStarPrior-class	Generic class for the LambdaStar parameters.
names-method	Gamma prior class for the LambdaStar parameter.
names-method	Normal prior class for Beta and Delta parameters.
names-method	Class for the result of the MCMC procedure.
names-method	Class for the initial values for the MCMC for the pompp package
names-method	Class that defines a model for the pompp package.
names-method	Joint prior class for the pompp package parameters
names.pompp_fit	Class for the result of the MCMC procedure.
NormalPrior	Create a Normal prior object for model specification.
NormalPrior-class	Normal prior class for Beta and Delta parameters.
plot.covariates_importance	Class for covariates importance matrices
pompp_fit-class	Class for the result of the MCMC procedure.
pompp_initial-class	Class for the initial values for the MCMC for the pompp package
pompp_model	Build a model to be used in the 'pompp' fitting function
pompp_model-class	Class that defines a model for the pompp package.
pompp_prior-class	Joint prior class for the pompp package parameters
print-method	Generic class for the beta and delta parameters.
print-method	Gamma prior class for the LambdaStar parameter.
print-method	Normal prior class for Beta and Delta parameters.
print-method	Class for the result of the MCMC procedure.
print-method	Class for the initial values for the MCMC for the pompp package
print-method	Class that defines a model for the pompp package.
print-method	Joint prior class for the pompp package parameters
print.BetaDeltaPrior	Generic class for the beta and delta parameters.
print.covariates_importance	Class for covariates importance matrices
print.GammaPrior	Gamma prior class for the LambdaStar parameter.
print.NormalPrior	Normal prior class for Beta and Delta parameters.
print.pompp_fit	Class for the result of the MCMC procedure.
print.pompp_initial	Class for the initial values for the MCMC for the pompp package
print.pompp_model	Class that defines a model for the pompp package.
print.pompp_prior	Joint prior class for the pompp package parameters
prior	Build a joint prior for pompp model parameters
show-method	Generic class for the beta and delta parameters.
show-method	Gamma prior class for the LambdaStar parameter.
show-method	Generic class for the LambdaStar parameters.
show-method	Normal prior class for Beta and Delta parameters.
show-method	Class for the result of the MCMC procedure.
show-method	Class for the initial values for the MCMC for the pompp package
show-method	Class that defines a model for the pompp package.
show-method	Joint prior class for the pompp package parameters
summary-method	Class for the result of the MCMC procedure.
summary.pompp_fit	Class for the result of the MCMC procedure.
[[-method	Class for the result of the MCMC procedure.