divideAutoMarkers {polySegratio}

S3 class divideAutoMarkers

Description

An S3 class which contains marker data and segregation proportions split into three groups corresponding to parents with ‘01’, ‘10’ and ‘11’ markers

Value

p10, p01, p11

lists for where the first, second components are heterozygous for parents 1, 2 and both resp. Each list contains

• descriptiontext containing a description for printing

• parentlabel for parent

• markersmarkers for specified parental type (including parents etc)

• extrasextra columns subsetted (if specified)

• seg.ratiossegregation ratios as class segRatio

Author(s)

Peter Baker [e-mail]

See Also

segRatio, sim.autoCross

Examples

p2 <- sim.autoCross(4,
dose.proportion=list(p01=c(0.7,0.3),p10=c(0.7,0.3),
                     p11=c(0.6,0.2,0.2)))
print(p2)

ss <- divide.autoMarkers(p2$markers)

print(ss)