summary-omicsData {pmartR} | R Documentation |
Produce a basic summary of a pmartR omicsData S3 Object
Description
This function will provide basic summary statistics for omicsData objects from the pmartR package.
Usage
## S3 method for class 'pepData'
summary(object, ...)
## S3 method for class 'proData'
summary(object, ...)
## S3 method for class 'lipidData'
summary(object, ...)
## S3 method for class 'metabData'
summary(object, ...)
## S3 method for class 'nmrData'
summary(object, ...)
## S3 method for class 'seqData'
summary(object, ...)
Arguments
object |
an object of the class 'lipidData', 'metabData', 'pepData',
'proData', nmrData', or 'seqData' usually created by |
... |
further arguments passed to or from other methods. |
Value
a summary table for the pmartR omicsData object. If assigned to a variable, the elements of the summary table are saved in a list format.
Author(s)
Lisa Bramer, Kelly Stratton, Thomas Johansen
Examples
library(pmartRdata)
pep_summary <- summary(pep_object)
iso_summary <- summary(isobaric_object)
pro_summary <- summary(pro_object)
metab_summary <- summary(metab_object)
lipid_summary <- summary(lipid_neg_object)
nmr_summary <- summary(nmr_identified_object)
rnaseq_summary <- summary(rnaseq_object)
[Package pmartR version 2.4.5 Index]