| configShow {phyloTop} | R Documentation |
Plot a tree highlighting configurations
Description
Plot a tree, highlighting configurations of a given size.
Usage
configShow(tree, configSize, mainCol = "black", configCol = "red", ...)
Arguments
tree |
a tree of class |
configSize |
an integer giving the configuration size of interest |
mainCol |
colour for branches which are not in configurations of the chosen size (default is black) |
configCol |
colour for branches which are in such configurations (default is red) |
... |
further arguments to be passed to plot.phylo |
Value
A plot of the tree, highlighting the configurations of the given size.
Author(s)
Michelle Kendall michelle.louise.kendall@gmail.com
Michael Boyd mboyd855@gmail.com
Examples
## Highlight pitchforks in a random tree with 20 tips:
configShow(rtree(20),3, edge.width=2)
[Package phyloTop version 2.1.2 Index]