J {photosynthesis} | R Documentation |
J: Rate of electron transport (umol/m^2/s)
Description
Calculate the rate of electron transport as a function of photosynthetic photon flux density (PPFD).
Usage
J(pars, unitless = FALSE)
Arguments
pars |
Concatenated parameters ( |
unitless |
Logical. Should |
Details
as a function of PPFD is the solution to the quadratic expression:
Symbol | R | Description | Units | Default |
| J_max | potential electron transport (T_leaf) | mol CO2 / (m s) | calculated |
| phi_J | initial slope of the response of J to PPFD | none | 0.331 |
PPFD | PPFD | photosynthetic photon flux density | mol quanta / (m^2 s) | 1500 |
| theta_J | curvature factor for light-response curve | none | 0.825 |
Value
Value in mol/ (m^2 s) of class
units
Examples
library(magrittr)
library(photosynthesis)
bake_par = make_bakepar()
constants = make_constants(use_tealeaves = FALSE)
enviro_par = make_enviropar(use_tealeaves = FALSE)
leaf_par = make_leafpar(use_tealeaves = FALSE)
enviro_par$T_air = leaf_par$T_leaf
leaf_par %<>% bake(enviro_par, bake_par, constants)
pars = c(leaf_par, enviro_par, constants)
J(pars, FALSE)
[Package photosynthesis version 2.1.4 Index]