run_iivsearch {pharmr} | R Documentation |
run_iivsearch
Description
Run IIVsearch tool. For more details, see :ref:iivsearch
.
Usage
run_iivsearch(
algorithm = "top_down_exhaustive",
iiv_strategy = "no_add",
rank_type = "bic",
linearize = FALSE,
cutoff = NULL,
results = NULL,
model = NULL,
keep = c("CL"),
strictness = "minimization_successful or (rounding_errors and sigdigs>=0.1)",
correlation_algorithm = NULL,
E_p = NULL,
E_q = NULL,
...
)
Arguments
algorithm |
(str) Which algorithm to run when determining number of IIVs. |
iiv_strategy |
(str) If/how IIV should be added to start model. Default is 'no_add'. |
rank_type |
(str) Which ranking type should be used. Default is BIC. |
linearize |
(logical) Wheter or not use linearization when running the tool. |
cutoff |
(numeric (optional)) Cutoff for which value of the ranking function that is considered significant. Default is NULL (all models will be ranked) |
results |
(ModelfitResults (optional)) Results for model |
model |
(Model (optional)) Pharmpy model |
keep |
(array(str) (optional)) List of IIVs to keep. Default is "CL" |
strictness |
(str (optional)) Strictness criteria |
correlation_algorithm |
(str (optional)) Which algorithm to run for the determining block structure of added IIVs. If NULL, the algorithm is determined based on the 'algorithm' argument |
E_p |
(numeric (optional)) Expected number of predictors for diagonal elements (used for mBIC). Must be set when using mBIC and when the argument 'algorithm' is not 'skip' |
E_q |
(numeric (optional)) Expected number of predictors for off-diagonal elements (used for mBIC). Must be set when using mBIC
and when the argument |
... |
Arguments to pass to tool |
Value
(IIVSearchResults) IIVsearch tool result object
Examples
## Not run:
model <- load_example_model("pheno")
results <- load_example_modelfit_results("pheno")
run_iivsearch('td_brute_force', results=results, model=model)
## End(Not run)