allTrees {phangorn}

Compute all trees topologies.

Description

allTrees computes all tree topologies for rooted or unrooted trees with up to 10 tips. allTrees returns bifurcating trees.

Usage

allTrees(n, rooted = FALSE, tip.label = NULL)

Arguments

n

Number of tips (<=10).

rooted

Rooted or unrooted trees (default: rooted).

tip.label

Tip labels.

Value

an object of class multiPhylo.

Author(s)

Klaus Schliep [e-mail]

See Also

rtree, nni

Examples

trees <- allTrees(5)

old.par <- par(no.readonly = TRUE)
par(mfrow = c(3,5))
for(i in 1:15)plot(trees[[i]])
par(old.par)