warblers {opticut} | R Documentation |
Warblers Data Set
Description
Five species of warblers were studied to determine the factors controlling the species abundances and competition (MacArthur 1958).
Usage
data("warblers")
Format
A list with 3 elements: xtab
is a list of sample x species matrices
(sec_prc
: percentages of total number of seconds of observations,
num_prc
: percentages of total number of observations in seconds,
sec_cnt
: counts based on percentages and totals of seconds,
num_cnt
: counts based on percentages and totals),
samp
is a data frame with sample level attributes such as height
(6 is the base, 1 is the top of trees, most trees were 50–60 feet tall)
and depth of branches in the canopy
(B: bare or lichen- covered base, M: middle zone of old needles,
T: terminal zone of new, less than 1.5 years old, needles or buds) ,
taxa
is a data frame with scientific and common names for the species.
Source
MacArthur 1958.
References
MacArthur, R. H., 1958. Population ecology of some warblers of northeastern coniferous forests. Ecology 39:599–619. <doi:10.2307/1931600>
Examples
data(warblers)
str(warblers)
warbh <- mefa4::groupSums(warblers$xtab$num_cnt, 1, warblers$samp$height)
warbd <- mefa4::groupSums(warblers$xtab$num_cnt, 1, warblers$samp$depth)
op <- par(mfrow=c(1,2))
matplot(rownames(warbh), warbh, type="b", xlab="height")
matplot(warbd, type="b", axes=FALSE, xlab="depth")
box()
axis(2)
axis(1, 1:3, rownames(warbd))
par(op)