codeVA |
Running automated method on VA data |
ConvertData |
Converting Input data with different coding scheme to standard format |
ConvertData.phmrc |
Convert standard PHMRC data into binary indicator format |
getCCC |
Calculate Overall chance-corrected concordance (CCC) |
getCSMF |
Obtain CSMF from fitted model |
getCSMF_accuracy |
Calculate CSMF accuracy |
getIndivProb |
Extract individual distribution of cause of death |
getPHMRC_url |
Get the URL to the PHMRC dataset |
getTopCOD |
Extract the most likely cause(s) of death |
interVA_train |
Extended InterVA method for non-standard input |
openVA_status |
Check openVA packages status |
openVA_update |
Update openVA packages |
plotVA |
Plot top CSMF for a fitted model |
stackplotVA |
plot grouped CSMF from a "insilico" object |