annot_char_grep {ontoFAST} | R Documentation |
Annotate a character statement with ontology terms
Description
Matches character statement and returns most similar ontology terms
Usage
annot_char_grep(ontology, char.statement, use.synonyms = TRUE, min_set = TRUE)
Arguments
ontology |
ontology. |
char.statement |
character statement |
use.synonyms |
if TRUE then the synonyms are used during search. The synonyms have to be included in the ontology using syn_extract() function |
min_set |
if TRUE eliminates higher order inferred ontology terms |
Value
The vector of matches ontology terms.
Examples
data(HAO)
annot_char_grep(HAO, "Mola on right mandible")
[Package ontoFAST version 1.0.0 Index]