calc_prob_mat {nat.nblast}

Calculate probability matrix from distances and dot products between neuron segments

Description

Calculate probability matrix from distances and dot products between neuron segments

Usage

calc_prob_mat(
  nndists,
  dotprods,
  distbreaks,
  dotprodbreaks = seq(0, 1, by = 0.1),
  ReturnCounts = FALSE
)

Arguments

nndists

a list of nearest-neighbour distances or a list of both nearest-neighbour distances and dot products.

dotprods

a list of dot products.

distbreaks

a vector specifying the breaks for distances in the probability matrix.

dotprodbreaks

a vector specifying the breaks for dot products in the probability matrix.

ReturnCounts

a Boolean indicating that counts should be returned instead of the default probabilities.

Value

A matrix with columns as specified by dotprodbreaks and rows as specified by distbreaks, containing probabilities (for default value of ReturnCounts=TRUE) or counts (if ReturnCounts=TRUE) for finding neuron segments with the given distance and dot product.