Validate and Convert Mutational Impacts Using Standard Genomic Dictionaries

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Documentation for package ‘mutationtypes’ version 0.0.1

• DESCRIPTION file.

Help Pages

mutation_types_convert_pave_to_maf	Convert PAVE Mutation Types to MAF
mutation_types_convert_so_to_maf	Convert SO Mutation Types to MAF
mutation_types_identify	Identify Mutation Dictionary Used
mutation_types_maf	Dictionary of MAF terms
mutation_types_maf_palette	Palettes: MAF
mutation_types_pave	Dictionary of PAVE terms
mutation_types_pave_palette	Palettes: PAVE
mutation_types_so	Dictionary of So terms
mutation_types_so_palette	Palettes: SO
select_most_severe_consequence_pave	Select the most severe consequence (PAVE)
select_most_severe_consequence_so	Select the most severe consequence (SO)