model_experiment {mstherm}

Model MSThermExperiment.

Description

Model multiple proteins from an MSThermExperiment object.

Usage

model_experiment(expt, proteins, np, ...)

Arguments

expt

An MSThermExperiment object

proteins

A vector of protein IDs to model (default is all proteins).

np

Number of parallel jobs to start (default = number of available processors)

...

Parameters passed to model_protein()

Value

MSThermResultSet object

Examples

control <- system.file("extdata", "demo_project/control.tsv", package="mstherm")
annots  <- system.file("extdata", "demo_project/annots.tsv",  package="mstherm")
expt    <- MSThermExperiment(control, annotations=annots)
expt    <- normalize_to_std(expt, "cRAP_ALBU_BOVIN", plot=FALSE)

res     <- model_experiment(expt, bootstrap=FALSE, np=2)
summary(res)