msig_geneSymbol {msig}

Retrieve gene by Gene Symbol from MsigDB

Description

Retrieve gene by Gene Symbol from MsigDB

Usage

msig_geneSymbol(..., local = FALSE)

## S3 method for class 'list'
msig_geneSymbol(..., local = FALSE)

## S3 method for class 'data.frame'
msig_geneSymbol(..., local = FALSE)

## S3 method for class 'character'
msig_geneSymbol(..., local = FALSE)

Arguments

...

one or more geneset names, which can be little or capital.

local

logical, default is FALSE, whether to extract gene symbol from local database

Value

gene symbol

Examples

genes <- msig_geneSymbol('izadpanah_stem_cell_adipose_vs_bone_dn')
genes <- msig_geneSymbol('izadpanah_stem_cell_adipose_vs_bone_dn',
                   'REACTOME_DEGRADATION_OF_AXIN')